1:55516888 G / GA


Filter Status
EXAC_COV_BELOW80percent
dbSNP
Not found in dbSNP
UCSC
1-55516888-G-GA
ExAC
1-55516888-G-GA
ClinVar
Click to search for variant in Clinvar

Annotations

This variant falls on 4 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Genotype Counts
Population HOM REF HET HOM ALT
AJ 4678 1 0
FIN - - -
NFE 6508 1 0
Carrier rate in population isolates
Population Rate
AJ -
FIN -
Note: Carrier rate for "AJ" was estimated from set of individuals with AJ fraction of at least 90%. Individuals from Northern Finland were removed to estimate the carrier rate for "FIN". Carrier rate is estimated for alternate allele only.
Population Case-Control statistics
IBD
Population IBD AF non-IBD AF Odds Ratio P-value
European (Ashkenazi-Jewish) 0.0001983 0 0.1403 0.2904
Non-Finnish European - - - -
European (Finnish) - - - -
Total - - 0.7173
[0.4855, 1.06]
1
CD
Population CD AF non-CD AF Odds Ratio P-value
European (Ashkenazi-Jewish) - - - -
Non-Finnish European - - - -
European (Finnish) - - - -
Total - - -9
[-9, -9]
NA
UC
Population UC AF non-UC AF Odds Ratio P-value
European (Ashkenazi-Jewish) - - - -
Non-Finnish European - - - -
European (Finnish) - - - -
Total - - -9
[-9, -9]
NA
Note: 95% credible interval for odds ratio is reported in brackets.