1:169519049 T / C



Annotations

This variant falls on 3 transcripts in 1 genes:

Note: This list may not include additional transcripts in the same gene that the variant does not overlap.
Population Genotype Counts
Population HOM REF HET HOM ALT
AJ 2 219 5462
FIN 7 454 11018
NFE 4 389 7345
Carrier rate in population isolates
Population Rate
AJ 1 in 1
FIN 1 in 1
Note: Carrier rate for "AJ" was estimated from set of individuals with AJ fraction of at least 90%. Individuals from Northern Finland were removed to estimate the carrier rate for "FIN". Carrier rate is estimated for alternate allele only.
Population Case-Control statistics
IBD
Population IBD AF non-IBD AF Odds Ratio P-value
European (Ashkenazi-Jewish) 0.9798 0.9813 1.064 0.6738
Non-Finnish European 0.9766 0.9702 1.295 0.01328
European (Finnish) 0.9806 0.9793 0.9821 0.9285
Total - - 1.174
[1.018, 1.353]
0.03853
CD
Population CD AF non-CD AF Odds Ratio P-value
European (Ashkenazi-Jewish) 0.9815 0.9813 1.14 0.4201
Non-Finnish European 0.9784 0.9702 1.411 0.007005
European (Finnish) 0.9833 0.9793 1.089 0.8168
Total - - 1.281
[1.078, 1.522]
0.01066
UC
Population UC AF non-UC AF Odds Ratio P-value
European (Ashkenazi-Jewish) 0.9763 0.9813 0.8637 0.5143
Non-Finnish European 0.9779 0.9702 1.359 0.02545
European (Finnish) 0.9821 0.9793 1.052 0.844
Total - - 1.168
[0.9693, 1.406]
0.1424
Note: 95% credible interval for odds ratio is reported in brackets.